Harmful Microalgae Exhibit Broad Environmental Adaptability in High‐Salinity Area Across the Dafengjiang River Estuary

ABSTRACT Harmful algal blooms (HABs) often occur in estuaries due to their unique environmental heterogeneity, posing significant environmental and human health risks. However, there is limited understanding of the community composition and community‐level change points (thresholds) of harmful microalgae in subtropical estuaries. This study explored harmful microalgae community structure and thresholds in the Dafengjiang River estuary using a metabarcoding approach. The results revealed 63 harmful microalgae species, and major species included Guinardia flaccida , Prorocentrum cordatum , Thalassiosira punctigera , Pseudo‐nitzschia galaxiae and T. gravida . Nonparametric change‐point analysis and threshold indicator taxa analysis (TITAN) showed threshold responses of harmful microalgae community structure to ammonium (57.5–60 μg·L −1 ), total phosphorus (27.8–28.5 μg·L −1 ) and dissolved inorganic phosphorus (14.5–28 μg·L −1 ) along the salinity gradient. Wider environmental thresholds were also found in hypersaline areas. Additionally, Pyrodinium bahamense , Pfiesteria piscicida , Skeletonema tropicum and T. punctigera were sensitive to environmental changes and thus could be used as bioindicators. Overall, our study unveiled diverse abrupt transitions of harmful microalgal communities, providing a risk assessment for human health and ecological safety in subtropical estuary ecosystems.