Sediminibacillus dalangtanensis sp. nov., a moderate halophile isolated from hypersaline sediments of the Qaidam Basin in Northwest China

生物 16S核糖体RNA 嗜盐菌 微生物学 拉伤 肽聚糖 二氨基酸 磷脂酰甘油 糖脂 二氨基二甲酸 细菌 植物 基因 细胞壁 生物化学 磷脂 磷脂酰胆碱 基因序列 遗传学 解剖
作者
Tur‐Fu Huang,Qiliang Lai,Long Xiao,Li Gong,Zongze Shao,Hongmei Wang,Yi Xu,Ricardo Amils,Cristina Escudero,José Vicente Martínez
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:71 (8)
标识
DOI:10.1099/ijsem.0.005501
摘要

A Gram-stain-positive, moderately halophilic, aerobic, endospore-forming, rod-shaped bacterium, designated strain DP4-553-S T , was isolated from hypersaline sediment collected from the Dalangtan Playa in the Qaidam Basin, Northwest PR China. Growth occurred within 0–21.6% (w/v) NaCl (optimum 7.2%) at pH 5.5–9.0 (optimum pH 7.0) and at 4–45 °C (optimum 37 °C). Phylogeny based on 16S rRNA gene sequences indicated that strain DP4-553-S T belonged to the genus Sediminibacillus , with high 16S rRNA gene sequence similarity to Sediminibacillus halophilus EN8d T (99.5 %), Sediminibacillus terrae JSM 102062 T (99.4 %), Virgibacillus senegalensis SK-1 T (99.3 %) and Sediminibacillus albus NHBX5 T (98.3 %). The G+C content of the chromosomal DNA was 43.6 mol %. The average amino acid identity, average nucleotide identity and digital DNA–DNA hybridization values between strain DP4-553-S T and the four close type strains were 71.2–93.3, 74.0–90.5 and 20.0–41.4 %, respectively. The whole genomic analysis showed that strain DP4-553-S T constituted a different taxon separated from the recognized Sediminibacillus species. The major cellular fatty acids were anteiso-C 15 : 0 , anteiso-C 17 : 0 , iso-C 16 : 0 , C 16 : 0 and iso-C 15 : 0 . The type strain contained cell-wall peptidoglycan based on diaminopimelic acid and possessed menaquinone-7 as the major respiratory isoprenoid quinone. The polar lipid pattern consisted of diphosphatidylglycerol, phosphatidylglycerol, four unidentified glycolipids, phosphatidylcholine, aminophospholipid, aminolipid and seven unidentified phospholipids. The combined data from phenotypic and genotypic studies demonstrated that strain DP4-553-S T represents a novel species of the genus Sediminibacillus , for which the name Sediminibacillus dalangtanensis sp. nov. is proposed, the type strain is DP4-553-S T (=MCCC 1K03838 T = KCTC 43250 T ).
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