Transcriptome analysis provides new insight into the mechanism of Bombyx mori under zinc exposure

家蚕 生物 转录组 机制(生物学) 戒毒(替代医学) 小桶 中肠 计算生物学 细胞生物学 遗传学 基因 生态学 基因表达 幼虫 冶金 哲学 认识论 材料科学 医学 替代医学 病理
作者
Yan-Xia Shi,Dandan Bian,Xin Liu,Junjie Jiang,Xi-Rong Zhu,Dai-Zhen Zhang,Qiu-Ning Liu,Boping Tang,Li‐Shang Dai
出处
期刊:Comparative Biochemistry and Physiology Part D: Genomics and Proteomics [Elsevier BV]
卷期号:52: 101320-101320
标识
DOI:10.1016/j.cbd.2024.101320
摘要

Zinc is a significant source of heavy metal pollution that poses risks to both human health and biodiversity. Excessive concentrations of zinc can hinder the growth and development of insects and trigger cell death through oxidative damage. The midgut is the main organ affected by exposure to heavy metals. The silkworm, a prominent insect species belonging to the Lepidoptera class and widely used in China, serves as a model for studying the genetic response to heavy metal stress. In this study, high-throughput sequencing technology was employed to investigate detoxification-related genes in the midgut that are induced by zinc exposure. A total of 11,320 unigenes and 14,723 transcripts were identified, with 553 differentially expressed genes (DEGs) detected, among which 394 were up-regulated and 159 were down-regulated. The Gene Ontology (GO) analysis revealed that 452 DEGs were involved in 18 biological process subclasses, 14 cellular component subclasses and 8 molecular functional subclasses. Furthermore, the KEGG analysis demonstrated enrichment in pathways such as Protein digestion, absorption and Lysosome. Validation of the expression levels of 9 detoxification-related DEGs through qRT-PCR confirmed the accuracy of the RNA-seq results. This study not only contributes new insights into the detoxification mechanisms mechanism of silkworms against zinc contamination, but also serves as a foundation basis for understanding the molecular detoxification processes in lepidopteran insects.

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