Construction of an adverse outcome pathway framework for arsenic-induced lung cancer using a network-based approach

肺癌 癌变 不良结局途径 癌症 生物 生物信息学 癌症研究 肿瘤科 医学 计算生物学 化学 内科学 有机化学
作者
Cheng Cheng,Bowen Fan,Yi Yang,Peiwen Wang,Meng Wu,Haibo Xia,Binafsha Manzoor Syed,Hao Wu,Qizhan Liu
出处
期刊:Ecotoxicology and Environmental Safety [Elsevier BV]
卷期号:283: 116809-116809 被引量:6
标识
DOI:10.1016/j.ecoenv.2024.116809
摘要

Environmental pollutants are considered as a cause of tumorigenesis, but approaches to assess their risk of causing tumors remain insufficient. As an alternative approach, the adverse outcome pathway (AOP) framework is used to assess the risk of tumors caused by environmental pollutants. Arsenic is a pollutant associated with lung cancer, but early assessment of lung cancer risk is lacking. Therefore, we applied the AOP framework to arsenic-induced lung cancer. A systematic review revealed increased risks of lung cancer following exposure to a range of arsenic concentrations in drinking water (OR = 1.83, 95 % CI = 1.46-2.30). We obtained, from public databases, genes related to risk of arsenic-induced lung cancer. Then, Cox and LASSO regressions were used to screen target genes from the risk genes. Subsequently, target genes, phenotypes, and pathways were used to construct the computational AOP network, which was determined by Cytoscape to have 156 edges and 45 nodes. Further, target genes, phenotypes, and pathways were used as molecular initiating events and key events to construct the AOP framework depending on upstream and downstream relationships. In the AOP framework, by Weight of Evidence, arsenic exposure increased levels of EGFR, activated the PI3K/AKT pathway, regulated cell proliferation by promoting the G1/S phase transition, and caused generation of lung cancers. External validation was achieved through arsenite-induced, malignant transformed human bronchial epithelial (HBE) cells. Overall, these results, by integration into existing data to construct an AOP framework, provide insights into the assessment of lung cancer risk for arsenic exposure. Special attention needs to be focused on populations with low-dose arsenic exposure.
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