The polymorphism analysis for CD36 among platelet donors

CD36 血小板 桑格测序 生物 突变 核糖核酸 分子生物学 野生型 流式细胞术 血小板活化 单核苷酸多态性 基因 等位基因 无声突变 基因型 遗传学 免疫学 错义突变 突变体
作者
Qilu Lyu,Yu‐Wei Lin,Yiming Pan,Xiaoyu Guan,Xin Ji,Mozhen Peng,Qian Li,Zhijang Wang,Zhihui Zhang,Zhen Luo,Pincan Su,Jue Wang
出处
期刊:Scientific Reports [Nature Portfolio]
卷期号:14 (1) 被引量:4
标识
DOI:10.1038/s41598-024-58491-z
摘要

Abstract CD36 may defect on platelets and/or monocytes in healthy individuals, which was defined as CD36 deficiency. However, we did not know the correlation between the molecular and protein levels completely. Here, we aim to determine the polymorphisms of the CD36 gene, RNA level, and CD36 on platelets and in plasma. The individuals were sequenced by Sanger sequencing. Bioinformational analysis was used by the HotMuSiC, CUPSAT, SAAFEC-SEQ, and FoldX. RNA analysis and CD36 protein detection were performed by qPCR, flow cytometry, and ELISA. In this study, we found c.1228_1239 del ATTGTGCCTATT (allele frequency = 0.0072) with the highest frequency among our cohort, and one mutation (c.1329_1354 dup GATAGAAATGATCTTACTCAGTGTTG) was not present in the dbSNP database. 5 mutations located in the extracellular domain sequencing region with confirmation in deficient individuals, of which c.284T>C, c.512A>G, c.572C>T, and c.869T>C were found to have a deleterious impact on CD36 protein stability. Furthermore, the MFI of CD36 expression on platelets in the mutation-carry, deleterious-effect, and deficiency group was significantly lower than the no-mutation group ( P < 0.0500). In addition, sCD36 levels in type II individuals were significantly lower compared with positive controls ( P = 0.0060). Nevertheless, we found the presence of sCD36 in a type I individual. RNA analysis showed CD36 RNA levels in platelets of type II individuals were significantly lower than the positive individuals ( P = 0.0065). However, no significant difference was observed in monocytes ( P = 0.7500). We identified the most prevalent mutation (c.1228_1239 del ATTGTGCCTATT) among Kunming donors. Besides, our results suggested RNA level alterations could potentially underlie type II deficiency. Furthermore, sCD36 may hold promise for assessing immune reaction risk in CD36-deficient individuals, but more studies should be conducted to validate this hypothesis.
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