Comprehensive profiling of lactylation-associated genes in pulmonary hypertension through bulk and single-cell RNA sequencing integration

基因 肺动脉高压 生物 计算生物学 免疫系统 核糖核酸 基因表达谱 遗传学 仿形(计算机编程) DNA测序 生物信息学 细胞 基因组学 基因表达 RNA序列 免疫学
作者
Rui Han,Ying Wang,Xuejin Lu,Wenhao Li,Wenlong Wu,Wanrong Wang,Daxiong Zeng,Ran Wang
出处
期刊:Respiratory Research [BioMed Central]
卷期号:27 (1): 36-36 被引量:3
标识
DOI:10.1186/s12931-025-03446-9
摘要

BACKGROUND: Pulmonary hypertension (PH) is a progressive disorder with high pulmonary arterial pressure, causing right ventricular dysfunction. Understanding PH's molecular basis is vital for therapy development, but research on lactylation's role in PH is limited and needs more investigation. METHODS: We integrated bulk RNA-seq datasets (GSE113439, GSE186996) and single-cell RNA-seq data (GSE210248) from PH patients and controls Differential expression analysis identified lactylation-associated hub genes. Functional enrichment (GO/KEGG), immune infiltration, and cell-cell communication analyses were performed. In vitro validation included RT-PCR and western blot on hypoxic pulmonary artery smooth muscle cells (PASMCs). RESULTS: We identified lymphocyte cytosolic protein 1 (LCP1) as a core lactylation-related hub gene, significantly upregulated in PH and validated in human/rat models. Single-cell profiling revealed elevated lactylation levels in vascular smooth muscle cells (VSMCs), T lymphocytes, and monocytes/macrophages within PH tissues. Cell communication analysis implicated TWEAK signaling from monocytes/macrophages to VSMCs as a driver of vascular remodeling. Metabolic pathways (e.g., glycolysis, bile acid metabolism) correlated strongly with lactylation activity. In vitro, hypoxia-induced LCP1 overexpression in PASMCs confirmed bioinformatic findings. CONCLUSION: We analyzed lactylation-related genes in PH, identifying LCP1 as a key diagnostic marker, and described immune cell lactylation in PH patients, offering insights for future research.
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