Identification of novel variants in hereditary spherocytosis patients by whole-exome sequencing

遗传性球形红细胞增多症 外显子组测序 鉴定(生物学) 外显子组 遗传学 计算生物学 球形红细胞增多 突变 生物 医学 基因 免疫学 植物 脾切除术 脾脏
作者
Li Qin,Yujiao Jia,Haoxu Wang,Haoxu Wang,Yuan Feng,Junyan Zou,Jianfeng Zhou,Changshun Yu,Bingqing Huang,Ruixue Zhang,Lihui Shi,Jigang Xiao,Yuping Zhao,Qi Sun,Zhijian Xiao,Huijun Wang,Huijun Wang
出处
期刊:Clinica Chimica Acta [Elsevier BV]
卷期号:565: 119989-119989 被引量:10
标识
DOI:10.1016/j.cca.2024.119989
摘要

Defects in erythrocyte membrane proteins can cause the most common type of inherited hemolytic anemia, so called hereditary spherocytosis (HS). It is characterized by the appearance of spherocytes in peripheral blood, hemolytic anemia, splenomegaly, jaundice and gallstones. Due to difficulty of diagnosis solely based on aforementioned parameters, the addition of genetic testing seems to be effective and most acknowledged. Up to date, pathogenic variations in five genes encoding membrane proteins (ANK1, SPTA1, SPTB, SLC4A1, EPB42) are identified to cause HS. Here, we have studied the genetic spectrum in forty-one patients with clinically suspected HS and their families, as well as their genotype-phenotype correlations. Pathogenic mutations in ANK1, SPTB, SLC4A1 and SPTA1 were found in 17 (41.5 %), 12 (29.3 %), 7 (17.1 %) and 5 (12.2 %) patients, respectively. Deleterious variants include 12 missense, 15 nonsense, 12 frameshift, and 4 splicing variants. Among these variations 32 were novel. In our genotype-phenotype analysis, platelet levels in SPTB (p = 0.021) and SLC4A1 (p = 0.02) patients were found to be significantly lower than ANK1 patients. In addition, LDH levels in SPTB patients were remarkably lower than patients with ANK1 mutations (p = 0.025).
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