The expression of seven key genes can predict distant metastasis of colorectal cancer to the liver or lung

医学 结直肠癌 转移 逻辑回归 接收机工作特性 肺癌 逐步回归 小桶 肿瘤科 内科学 癌症 基因 基因表达 遗传学 基因本体论 生物
作者
Li Tang,Yuan Lei,Yao Jiang Liu,Bo Tang,Shiming Yang
出处
期刊:Journal of Digestive Diseases [Wiley]
卷期号:21 (11): 639-649 被引量:13
标识
DOI:10.1111/1751-2980.12936
摘要

Objective It is unclear how primary colorectal cancer (CRC) cells select to metastasize to the liver or lungs, the most frequent distant metastasis of CRC. We aimed to identify the key genes and pathways that may predict the distant metastasis of CRC to these sites. Methods Three gene expression array datasets from the Gene Expression Omnibus were analyzed. Protein–protein network analyses, best subsets regressions and backward stepwise regression analyses were used to screen the key genes and their expressions were used to construct a predictive logistic regression model. Expression data from local clinical samples were used as a validation dataset. The receiver operating characteristic (ROC) curve was used to test the performance of the predictive model. Results In total, 59 differentially expressed genes (DEG) related to liver‐metastasis, 90 related to lung metastasis and 45 related to both liver and lung metastasis were identified. The KEGG pathways and gene oncology (GO) terms that were enriched in liver and lung metastasis were identified. A predictive logistic regression model consisted of SPARC, COL1A2, MMP9, COL11A1, COL3A1, CXCL12 and THBS2 was established. The area under the ROC curve reached 0.839 in predicting liver and lung metastasis, using our clinical samples as the validation dataset. Conclusions Seven key genes capable of predicting liver and lung metastasis of colorectal cancer were identified, which provides clues for exploring the mechanism of selecting target organs during the metastatic process in CRC and inspires the researches for new potential targets for therapy to inhibit metastasis.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
山城完成签到 ,获得积分10
1秒前
JHcHuN发布了新的文献求助10
1秒前
CipherSage应助沉静大有采纳,获得10
3秒前
希望天下0贩的0应助jianhua采纳,获得10
3秒前
青菜完成签到,获得积分10
7秒前
淡然觅荷完成签到 ,获得积分10
7秒前
9秒前
qq完成签到,获得积分10
9秒前
小棉背心完成签到 ,获得积分10
11秒前
一程完成签到 ,获得积分10
11秒前
若邻发布了新的文献求助30
13秒前
14秒前
小鱼儿完成签到,获得积分10
15秒前
LGH完成签到 ,获得积分10
16秒前
南北完成签到,获得积分10
16秒前
16秒前
17秒前
科研通AI5应助兴奋小丸子采纳,获得10
18秒前
19秒前
Lynn完成签到,获得积分10
21秒前
磊磊完成签到,获得积分10
21秒前
沉静大有发布了新的文献求助10
22秒前
小小完成签到 ,获得积分10
23秒前
追梦发布了新的文献求助10
23秒前
JXDYYZK完成签到,获得积分10
26秒前
科研通AI2S应助Jodie采纳,获得10
29秒前
落寞的半仙完成签到,获得积分10
30秒前
沉静的清涟完成签到,获得积分10
31秒前
31秒前
健忘鞋垫完成签到,获得积分10
34秒前
37秒前
jianhua发布了新的文献求助10
38秒前
沉静大有发布了新的文献求助10
39秒前
学渣一枚完成签到,获得积分10
39秒前
40秒前
含糊的画板完成签到,获得积分10
40秒前
41秒前
42秒前
wrx完成签到,获得积分20
42秒前
执意完成签到 ,获得积分10
43秒前
高分求助中
【此为提示信息,请勿应助】请按要求发布求助,避免被关 20000
Technologies supporting mass customization of apparel: A pilot project 450
Mixing the elements of mass customisation 360
Периодизация спортивной тренировки. Общая теория и её практическое применение 310
the MD Anderson Surgical Oncology Manual, Seventh Edition 300
Nucleophilic substitution in azasydnone-modified dinitroanisoles 300
Political Ideologies Their Origins and Impact 13th Edition 260
热门求助领域 (近24小时)
化学 材料科学 医学 生物 工程类 有机化学 物理 生物化学 纳米技术 计算机科学 化学工程 内科学 复合材料 物理化学 电极 遗传学 量子力学 基因 冶金 催化作用
热门帖子
关注 科研通微信公众号,转发送积分 3780920
求助须知:如何正确求助?哪些是违规求助? 3326387
关于积分的说明 10226987
捐赠科研通 3041612
什么是DOI,文献DOI怎么找? 1669520
邀请新用户注册赠送积分活动 799081
科研通“疑难数据库(出版商)”最低求助积分说明 758734