测地线
势能面
从头算
过渡状态
计算机科学
国家(计算机科学)
统计物理学
点(几何)
势能
弦(物理)
最优化问题
能量(信号处理)
路径(计算)
算法
曲面(拓扑)
产品(数学)
能量最小化
物理
过渡点
鉴定(生物学)
从头算量子化学方法
曲面重建
数学优化
静止点
理论物理学
优化算法
拓扑(电路)
过渡态理论
作者
Diptarka Hait,Jan D. Estrada Pabón,Martin Stoehr,Todd J. Martı́nez
标识
DOI:10.1021/acs.jctc.5c01221
摘要
Efficient and reliable identification and optimization of transition state structures is a longstanding challenge in computational chemistry. Popular chain-of-states methods require hundreds if not thousands of ab initio calculations to generate initial guesses for local quasi-Newton optimizers, with persistent risk of collapse to an alternative stationary point on the potential energy surface (PES). Here, we show that high-quality guess structures for transition state optimization can be obtained by constructing the geodesic path between reactant and product structures on the PES generated by machine learning potentials (MLPs). We present an algorithm for optimization of such geodesic paths, as well as the associated codebase. We demonstrate effectiveness of this approach using the recent eSEN-sm-cons MLP. On average, the highest-energy point along these MLP geodesics requires 30% fewer quasi-Newton optimization steps to converge to the transition state compared to guesses from the fully ab initio freezing string method. Our approach therefore completely eliminates the need for ab initio calculations for the generation of transition state guesses and considerably speeds up subsequent structural optimization. Geodesic construction on ML PES thus promises to be a useful approach for efficient computational elucidation of complex chemical reaction networks.
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