生物
16S核糖体RNA
系统发育树
系统发育学
拉伤
基因
序列分析
细菌
核糖体RNA
微生物学
植物
核酸序列
属
遗传学
系统发育关系
化学分类学
树状图
微生物
作者
Junyao Xie,Yihang Yang,Fangyu Gao,Lijun Zhao,Tao Liu,Caixin Yang,Zhiming Kang,Ji Pu,Han Zheng,Jianguo Xu,Kui Dong
标识
DOI:10.1099/ijsem.0.007271
摘要
Four novel bacterial strains representing two novel species were isolated from in situ coal samples. Comparative analysis of 16S rRNA gene sequences showed that strains W1153 T and W1478 share the highest sequence similarity with Leucobacter tardus K 70/01 T (98.3%), whereas strains Z1108 T and W1038 share the highest sequence similarity with L. tardus K 70/01 T and Leucobacter exalbidus K-540B T (98.0%). Phylogenetic analysis based on 16S rRNA gene sequences and a core-genome phylogeny constructed from 665 core genes demonstrated that the four strains form two distinct clades, clearly separated from other species within the genus Leucobacter . Whole-genome sequencing revealed genome sizes ranging from 2.6 to 2.8 Mb, with G+C contents of 62.5–63.5 mol%. The average nucleotide identity and digital DNA–DNA hybridization values between the four strains and all recognized species within the genus Leucobacter ranged from 71.1 to 75.6% and 19.3 to 25.6%, respectively. The major cellular fatty acids of the four strains were anteiso-C 15 : 0 , anteiso-C 17 : 0 and iso-C 16 : 0 . The respiratory quinone types were MK-11 for strain W1153 T and MK-9(H8) for strain Z1108 T . The main cell-wall sugars were rhamnose and ribose, with 2,4-diaminobutyric acid present as the diagnostic diamino acid. Based on phenotypic characteristics, phylogenetic analyses and chemotaxonomic evidence, strains W1153 T and W1478, and Z1108 T and W1038, are proposed as representing two novel species within the genus Leucobacter , named Leucobacter shiyiweii sp. nov. and Leucobacter fengyongliangi sp. nov., respectively. The type strains are W1153 T (=GDMCC 1.5845 T =KCTC 59606 T ) and Z1108 T (=GDMCC 1.5846 T =KCTC 59607 T ).
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