变构调节
阿托伐他汀
化学
CYP3A4型
生物物理学
结合位点
基质(水族馆)
效应器
立体化学
分子动力学
血浆蛋白结合
变构酶
装订袋
生物化学
药理学
酶
细胞色素P450
计算化学
生物
生态学
作者
Ilia G. Denisov,Javier L. Baylon,Yelena V. Grinkova,Emad Tajkhorshid,Stephen G. Sligar
出处
期刊:Biochemistry
[American Chemical Society]
日期:2017-12-04
卷期号:57 (5): 805-816
被引量:25
标识
DOI:10.1021/acs.biochem.7b01012
摘要
Heterotropic interactions between atorvastatin (ARVS) and dronedarone (DND) have been deciphered using global analysis of the results of binding and turnover experiments for pure drugs and their mixtures. The in vivo presence of atorvastatin lactone (ARVL) was explicitly taken into account by using pure ARVL in analogous experiments. Both ARVL and ARVS inhibit DND binding and metabolism, while a significantly higher affinity of CYP3A4 for ARVL makes the latter the main modulator of activity (effector) in this system. Molecular dynamics simulations reveal significantly different modes of interactions of DND and ARVL with the substrate binding pocket and with a peripheral allosteric site. Interactions of both substrates with residues F213 and F219 at the allosteric site play a critical role in the communication of conformational changes induced by effector binding to productive binding of the substrate at the catalytic site.
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