等温滴定量热法
G-四倍体
费斯特共振能量转移
化学
DNA
圆二色性
荧光
超分子化学
背景(考古学)
鸟嘌呤
结晶学
分子
生物物理学
立体化学
核苷酸
生物化学
生物
晶体结构
有机化学
基因
古生物学
量子力学
物理
作者
Clément Kotras,Mathieu Fossépré,M. Röger,Virginie Gervais,Sébastien Richeter,Philippe Gerbier,Sébastien Ulrich,Mathieu Surin,Sébastien Clément
标识
DOI:10.3389/fchem.2019.00493
摘要
Guanine-quadruplexes (G4s) are targets for anticancer therapeutics. In this context, human telomeric DNA (HT-DNA) that can fold into G4s sequences are of particular interest, and their stabilization with small molecules through a visualizable process has become a challenge. As a new type of ligand for HT-G4, we designed a tetraimidazolium tetraphenylethene (TPE-Im) as a water-soluble aggregation-induced emission (AIE) luminogen. We study its G4-binding properties with HT-DNA by UV-Visible absorption, circular dichroism and fluorescence spectroscopies, which provide insights into the interactions between TPE-Im and G4-DNA. Remarkably, TPE-Im shows a strong fluorescence enhancement and large shifts upon binding to G4, which is valuable for detecting G4s. The association constants for the TPE-Im/G4 complex were evaluated in different solution conditions via isothermal titration calorimetry, and its binding modes are explored by molecular modeling showing a groove binding mechanism. The stabilization of G4 by TPE-Im has been assessed by Fluorescence Resonance Energy Transfer (FRET) melting assays, which show a strong stabilization of G4 (ΔT1/2 around +20 °C), together with a specificity towards G4 with respect to double-stranded DNA.
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