Objective To explore the effect of aging on cerebral mitochondrial (mt) DNA deletions, active oxygen radical level and total anti-oxidization ability of brain tissues. Methods SAM-P/8 and SAM-R/1 mice were respectively divided into three groups, i.e. infant group (0.5 month-old), youth group (2 month-old) and senior group (12 month-old), with six mice in each group. Cerebral mtDNA deletions were determined by PCR while total anti-oxidization ability and active oxygen radical levels were detected by chemical luminescent method. Results With aging, mtDNA deletions in the brain tissue of SAM-P/8 mice increased with an elevated level of mt active oxygen radical level and lowered total anti-oxidization ability. Conclusions The increase of oxidative damage in brain tissue of SAM-P/8 mice with ageing might be one of the causes resulting in memory learning impediment.