浆液性癌
浆液性液体
生物
克拉斯
卵巢癌
卵巢癌
外显子组测序
外显子组
癌症研究
清脆的
突变
癌症
基因
遗传学
生物化学
作者
Josephine Walton,Julianna Blagih,Darren Ennis,Elaine Leung,Suzanne Dowson,Malcolm Farquharson,Laura A. Tookman,Clare Orange,Dimitris Athineos,Susan Mason,David Stevenson,Karen Blyth,Douglas Strathdee,Frances R. Balkwill,Karen H. Vousden,Michelle Lockley,Iain A. McNeish
出处
期刊:Cancer Research
[American Association for Cancer Research]
日期:2016-08-17
卷期号:76 (20): 6118-6129
被引量:186
标识
DOI:10.1158/0008-5472.can-16-1272
摘要
There is a need for transplantable murine models of ovarian high-grade serous carcinoma (HGSC) with regard to mutations in the human disease to assist investigations of the relationships between tumor genotype, chemotherapy response, and immune microenvironment. In addressing this need, we performed whole-exome sequencing of ID8, the most widely used transplantable model of ovarian cancer, covering 194,000 exomes at a mean depth of 400× with 90% exons sequenced >50×. We found no functional mutations in genes characteristic of HGSC (Trp53, Brca1, Brca2, Nf1, and Rb1), and p53 remained transcriptionally active. Homologous recombination in ID8 remained intact in functional assays. Further, we found no mutations typical of clear cell carcinoma (Arid1a, Pik3ca), low-grade serous carcinoma (Braf), endometrioid (Ctnnb1), or mucinous (Kras) carcinomas. Using CRISPR/Cas9 gene editing, we modeled HGSC by generating novel ID8 derivatives that harbored single (Trp53
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