生物
基因组
壳二孢属
全基因组测序
康蒂格
基因
单分子实时测序
顺序装配
叶斑病
遗传学
DNA测序
计算生物学
植物
枯萎病
转录组
基因表达
DNA测序器
作者
Yunbo Kuang,Zhe Wang,Abah Felix,Hongli Hu,Baohua Wang,Zonghua Wang,Huiping Zhang,Zuyun Ye,Jiandong Bao
标识
DOI:10.1094/mpmi-05-20-0137-a
摘要
Ascochyta versabilis is the fungal pathogen that causes the severe leaf spot disease of Pseudostellaria heterophylla (Miq.) Pax, a vital Chinese herbal plant. Here, we deployed PacBio single-molecule real-time long-read sequencing technology to generate a near-complete genome assembly for the A. versabilis KC1 strain and obtained a total of 9.80 Gb raw reads. These reads were processed into a 41.05 Mb genome assembly containing 95 contigs with N50 of 1.70 Mb and a maximum length of 3.93 Mb. A total of 10,457 gene models, of which 1,004 encode putatively secreted proteins, were identified in the genome. This high-quality genome assembly and gene annotation resource will facilitate the institution of functional genetic studies aimed at providing a better insight into the infection mechanisms of A. versabilis to support the development of effective control strategies for leaf spot disease of P. heterophylla.
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