The spectrum of FVIII gene variants detected by next generation sequencing in 236 Chinese non-inversion hemophilia A pedigrees

系谱图 桑格测序 多重连接依赖探针扩增 遗传学 索引 多路复用 DNA测序 基因 生物 基因型 外显子 单核苷酸多态性
作者
Juanjuan Chen,Qiang Li,Sheng Lin,Fenxia Li,Limin Huang,Wangjie Jin,Xu Yang,Xu Yang,Yihong Li,Kun Li,Yufeng Xiong,Dongmei Fan,Lei Zheng,Dixian Luo,Liyan Li,Xuexi Yang,Xuexi Yang
出处
期刊:Thrombosis Research [Elsevier BV]
卷期号:202: 8-13 被引量:11
标识
DOI:10.1016/j.thromres.2021.02.027
摘要

The reported variants of hemophilia A are mainly from European subjects and American subjects of European descent, and limited data are available from more diverse ethnic backgrounds. This study was performed to identify the causative variants in a large HA cohort from Chinese population.A total of 236 HA pedigrees were included. Molecular analysis of F8 gene was performed using next-generation sequencing (NGS) and then validated by Sanger sequencing and multiplex ligation probe amplification (MLPA) results. Variants were classified as pathogenic, likely pathogenic, variant of unknown significance, likely benign, and benign according to the American College of Medical Genetics and Genomics guidelines.A total of 186 F8 variants were identified, with 139 (139/186, 74.73%) point mutations, 44 (44/186, 23.66%) small insertions/deletions (InDels), and 3 (3/186, 1.61%) large deletions, they included 80 pathogenic and 84 likely pathogenic variants. Of these variants, 119 had been reported previously, and 67 were novel. No potentially causative mutations were found in the targeted F8 region in seventeen HA pedigrees.The spectrum of F8 variants identified in this study provides additional information about HA and enriches our knowledge of the variant spectrum in a wider range of ethnic backgrounds.
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