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Evaluation of two molecular techniques for rapid detection of the main dermatophytic agents of tinea capitis

多路复用 多重连接依赖探针扩增 生物 聚合酶链反应 头癣 犬小孢子虫 内转录区 分子诊断学 微生物学 遗传学 系统发育树 基因 外显子 园艺 抗真菌
作者
Shuwen Deng,Z. Zhou,Sybren de Hoog,Xiaoming Wang,Paride Abliz,Jiufeng Sun,Mohammad Javad Najafzadeh,Weihua Pan,Lei Wu,Zhu Shu,Hadiliya Hasimu,P. Zhang,Yun Guo,Danqi Deng,Wanqing Liao
出处
期刊:British Journal of Dermatology [Oxford University Press]
卷期号:173 (6): 1494-1500 被引量:14
标识
DOI:10.1111/bjd.14156
摘要

Tinea capitis is very common in Western China, with the most widespread aetiological agent being Trichophyton violaceum, while Microsporum canis is prevalent in the remainder of China. Conventional diagnostics and internal transcribed spacer (ITS) sequencing analyses have proven relatively limited due to the close phylogenetic relationship of anthropophilic dermatophytes. Therefore, alternative molecular tools with sufficient specificity, reproducibility and sensitivity are necessary. To evaluate two molecular techniques [multiplex ligation‐dependent probe amplification (MLPA) and rolling circle amplification (RCA)] for rapid detection of the aetiological agents of tinea capitis, T. violaceum and M. canis. Probes of RCA and MLPA were designed with target sequences in the rDNA ITS gene region. Strains tested consist of 31 T. violaceum, 22 M. canis and 24 reference strains of species that are taxonomically close to the target species. The specificity and reproducibility of RCA and MLPA in detection of T. violaceum and M. canis were both 100% in both species. Sensitivity testing showed that RCA was positive at concentrations down to 1·68 × 106 copies of DNA in the TvioRCA probe, and 2·7 × 108 copies of DNA in McRCA. MLPA yielded positive results at concentrations of DNA down to 1·68 × 101 copies in the TvioMLPA probe and 2·7 × 102 in McMLPA. The two techniques were sufficiently specific and sensitive for discriminating the target DNA of T. violaceum and M. canis from that of closely related dermatophytes. RCA and MLPA are advantageous in their reliability and ease of operation compared with standard polymerase chain reaction and conventional methods.
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