Environmental explanation of prostate cancer progression based on the comprehensive analysis of polychlorinated biphenyls

小桶 前列腺癌 列线图 计算生物学 生物信息学 基因本体论 基因 转录因子 肿瘤科 生物 生物信息学 癌症 医学 遗传学 内科学 基因表达
作者
Wen‐Cai Zheng,Fei Lin,Qian-Ren-Shun Qiu,Yu‐Peng Wu,Zhi‐Bin Ke,Shao‐Hao Chen,Dong‐Ning Chen,Qing‐Shui Zheng,Yong Wei,Xue‐Yi Xue,Ning Xu
出处
期刊:Science of The Total Environment [Elsevier BV]
卷期号:948: 174870-174870 被引量:9
标识
DOI:10.1016/j.scitotenv.2024.174870
摘要

Polychlorinated biphenyls (PCBs) have caused great environmental concerns. The study aims to investigate underlying molecular mechanisms between PCBs exposure and prostate cancer (PCa). To investigate the association between PCBs exposure and prostate cancer by using CTD, TCGA, and GEO datasets. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were conducted to explore pathways associated with PCBs-related genes (PRGs). Using Lasso regression analysis, a novel PCBs-related prognostic model was developed. Both internal and external validations were conducted to assess the model's validity. Molecular docking was utilized to assess the binding capacity of PCBs to crucial genes. At last, preliminary experimental validations were conducted to confirm the biological roles of Aroclor 1254 in PCa cells. The GO enrichment analysis of PRGs revealed that the biological processes were most enriched in the regulation of transcription from the RNA polymerase II promoter and signal transduction. The KEGG enrichment analysis showed that of the pathways in cancer is the most significantly enriched. Next, a PCBs-related model was constructed. In the training, test, GSE70770, and GSE116918 cohorts, the biochemical recurrences free survival of the patients with high-risk scores was considerably lower. The AUCs at 5 years were 0.691, 0.718, 0.714, and 0.672 in the four cohorts, demonstrating the modest predictive ability. A nomogram that incorporated clinical characteristics was constructed. The results of the anti-cancer drug sensitivity analysis show chemotherapy might be more beneficial for patients at low risk. The molecular docking analysis demonstrated PCBs' ability to bind to crucial genes. PCa cells exposed to Aroclor 1254 at a concentration of 1 μM showed increased proliferation and invasion capabilities. This study provides new insights into the function of PCBs in PCa and accentuates the need for deeper exploration into the mechanistic links between PCBs exposure and PCa progression.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
大莹莹完成签到 ,获得积分10
刚刚
王十七完成签到,获得积分10
1秒前
研友_VZG7GZ应助王晨光采纳,获得10
2秒前
2秒前
淡然常乐发布了新的文献求助10
3秒前
kevin发布了新的文献求助10
4秒前
xmcx25完成签到,获得积分10
4秒前
WLY完成签到,获得积分10
5秒前
5秒前
5秒前
6秒前
6秒前
6秒前
6秒前
科研通AI6.2应助kuka007采纳,获得10
6秒前
6秒前
6秒前
酷酷妙梦完成签到,获得积分10
8秒前
温柔以冬发布了新的文献求助10
8秒前
Zp完成签到,获得积分10
9秒前
luo完成签到,获得积分10
10秒前
yoyo发布了新的文献求助30
10秒前
123完成签到,获得积分10
10秒前
怡然的凌兰完成签到,获得积分10
11秒前
猪猪发布了新的文献求助10
11秒前
傻逼科研完成签到 ,获得积分10
12秒前
李爱国应助科研通管家采纳,获得50
12秒前
上官若男应助科研通管家采纳,获得10
12秒前
祁乾完成签到 ,获得积分10
12秒前
Owen应助科研通管家采纳,获得10
13秒前
13秒前
13秒前
华仔应助科研通管家采纳,获得10
13秒前
李健应助科研通管家采纳,获得10
13秒前
Lucas应助科研通管家采纳,获得10
13秒前
正直随阴给正直随阴的求助进行了留言
14秒前
香蕉觅云应助科研通管家采纳,获得10
14秒前
14秒前
赘婿应助科研通管家采纳,获得10
14秒前
顾矜应助科研通管家采纳,获得10
14秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
内視鏡的に摘除しえた十二指腸乳頭部腫瘍の2例 660
On nonlinear stability of contact discontinuities. In: Hyperbolic problems: theory, numerics, applications (Stony Brook, NY, 1994) 510
Management and the Arts 510
Matrix Methods in Data Mining and Pattern Recognition Second Edition 510
微电子器件实验教程 400
The Neuroscience of Language 400
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7678430
求助须知:如何正确求助?哪些是违规求助? 9243735
关于积分的说明 19924866
捐赠科研通 7249273
什么是DOI,文献DOI怎么找? 3287105
关于科研通互助平台的介绍 2444931
邀请新用户注册赠送积分活动 2290279