系统发育树
系统发育关系
生物
系统发育网络
系统发育学
树(集合论)
R包
进化生物学
计算机科学
数学
组合数学
遗传学
基因
程序设计语言
出处
期刊:Plant Diversity
[Elsevier BV]
日期:2022-12-24
卷期号:45 (3): 347-352
被引量:89
标识
DOI:10.1016/j.pld.2022.12.007
摘要
The previously released packages of the PhyloMaker series (i.e. S.PhyloMaker, V.PhyloMaker, and V.PhyloMaker2) have been broadly used to generate phylogenetic trees for ecological and biogeographical studies. Although these packages can be used to generate phylogenetic trees for any groups of plants and animals for which megatrees are available, they focus on generating phylogenetic trees for plants based on the megatrees provided by the packages. How to use these packages to generate phylogenetic trees based on other megatrees is not straightforward. Here, we present a new tool, which is called 'U.PhyloMaker', and a simple R script that can be used to easily generate large phylogenetic trees for both plants and animals at a relatively fast speed.
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