拟南芥
石碑
发起人
转录因子
生物
拟南芥
抄写(语言学)
酵母
计算生物学
遗传学
基因
植物
基因表达
突变体
语言学
哲学
作者
Allison Gaudinier,Lifang Zhang,John Reece-Hoyes,Mallorie Taylor‐Teeples,Li Pu,Zhijie Liu,Ghislaı̀n Breton,José L. Pruneda-Paz,Dahae Kim,Steve A. Kay,Albertha J.M. Walhout,Doreen Ware,Siobhán M. Brady
出处
期刊:Nature Methods
[Nature Portfolio]
日期:2011-10-30
卷期号:8 (12): 1053-1055
被引量:125
摘要
An almost-complete, sequence-verified collection of Arabidopsis thaliana root stele transcription factors is reported. The authors use it in the enhanced yeast-one hybrid (eY1H) assay to map gene regulatory interactions in the plant. Also in this issue, Reece-Hoyes et al. describe the eY1H pipeline. We present an Arabidopsis thaliana full-length transcription factor resource of 92% of root stele–expressed transcription factors and 74.5% of root-expressed transcription factors. We demonstrate its use with enhanced yeast one-hybrid (eY1H) screening for rapid, systematic mapping of plant transcription factor–promoter interactions. We identified 158 interactions with 13 stele-expressed promoters, many of which occur physically or are regulatory in planta.
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