Crystal Energy Landscape of Nifedipine by Experiment and Computer Prediction

构象异构 烷烃立体化学 分子 Crystal(编程语言) 晶体结构 能源景观 结晶学 化学 计算机科学 有机化学 生物化学 程序设计语言
作者
Yue Gui,Yingdi Jin,Shigang Ruan,Guangxu Sun,Vilmalí López-Mejías,Lian Yu
出处
期刊:Crystal Growth & Design [American Chemical Society]
卷期号:22 (2): 1365-1370 被引量:5
标识
DOI:10.1021/acs.cgd.1c01317
摘要

The six polymorphs of nifedipine (NIF) known at present have been discovered over the past 50 years, and the most recent one (δ), discovered in 2020, came from an unusual route. This polymorph is ranked second in thermodynamic stability but evaded all previous workers until its melt was seeded with the crystal of a foreign substance, felodipine, in which the molecule has a different conformation from all other NIF polymorphs known at that time. Given this unusual discovery in the lab, we investigated whether crystal structure prediction (CSP) can find this and other polymorphs in a "routine" search. We show that our CSP finds all ordered polymorphs of NIF known at present as low-energy structures (Ranks 1, 3, 4, and 43), including the most recent one unveiled by pseudoseeding (Rank 4). NIF being a flexible molecule, it is of interest to learn which of its many conformers provides the best building block for crystals. An experimental investigation of this question is limited by survival; that is, information exists on the structures that are observed but not on those that are difficult to observe or not yet discovered. In this regard, our "computer experiments" access the full range of possibilities. We find that the synperiplanar (sp) conformer with respect to phenyl torsion produces lower-energy crystals than the antiperiplanar (ap) conformer, with the most stable ap crystal being 4 kJ/mol higher in energy than the most stable sp structure. Experimentally, the sp conformer dominates the ap in solution and is the only conformer observed in crystals. With respect to the ester torsions, the cis/trans conformer produces the lowest-energy crystals, followed by the cis/cis conformer and by the trans/trans conformer. Experimentally, five of the six known polymorphs contain the cis/trans conformer, one contains the cis/cis conformer, and none contain the trans/trans conformer. Overall, the CSP is remarkably successful in predicting the polymorphs of NIF in spite of its complex conformational space and provides a quantitative assessment of the relative costs of employing different conformers as units of crystal building.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
GTRK完成签到 ,获得积分10
1秒前
3秒前
4秒前
4秒前
zimo完成签到,获得积分10
4秒前
......发布了新的文献求助30
6秒前
满眼星辰发布了新的文献求助10
7秒前
Ari_Kun完成签到 ,获得积分10
8秒前
zimo发布了新的文献求助10
8秒前
9秒前
lyt完成签到,获得积分10
9秒前
9秒前
10秒前
朱可芯发布了新的文献求助10
11秒前
wonderful完成签到,获得积分10
12秒前
12秒前
win完成签到 ,获得积分10
13秒前
13秒前
14秒前
雷yg发布了新的文献求助10
14秒前
香蕉觅云应助zimo采纳,获得10
15秒前
15秒前
朱可芯完成签到,获得积分10
17秒前
狂野世立发布了新的文献求助10
17秒前
XQQDD完成签到,获得积分10
17秒前
元谷雪发布了新的文献求助30
18秒前
岁月如歌完成签到,获得积分20
19秒前
岁月如歌发布了新的文献求助10
21秒前
23秒前
优克莉伍德完成签到,获得积分20
24秒前
24秒前
秋寒完成签到,获得积分20
24秒前
田様应助naturehome采纳,获得10
26秒前
zhouleiwang完成签到,获得积分10
26秒前
雷yg完成签到,获得积分10
28秒前
vic发布了新的文献求助10
30秒前
31秒前
安静傲丝完成签到,获得积分20
31秒前
......完成签到,获得积分10
33秒前
荣仔发布了新的文献求助10
34秒前
高分求助中
Thinking Small and Large 500
Algorithmic Mathematics in Machine Learning 500
Advances in Underwater Acoustics, Structural Acoustics, and Computational Methodologies 400
Getting Published in SSCI Journals: 200+ Questions and Answers for Absolute Beginners 300
The Monocyte-to-HDL ratio (MHR) as a prognostic and diagnostic biomarker in Acute Ischemic Stroke: A systematic review with meta-analysis (P9-14.010) 240
The Burge and Minnechaduza Clarendonian mammalian faunas of north-central Nebraska 206
Fatigue of Materials and Structures 200
热门求助领域 (近24小时)
化学 材料科学 医学 生物 工程类 有机化学 物理 生物化学 纳米技术 计算机科学 化学工程 内科学 复合材料 物理化学 电极 遗传学 量子力学 基因 冶金 催化作用
热门帖子
关注 科研通微信公众号,转发送积分 3831507
求助须知:如何正确求助?哪些是违规求助? 3373721
关于积分的说明 10481076
捐赠科研通 3093686
什么是DOI,文献DOI怎么找? 1702910
邀请新用户注册赠送积分活动 819201
科研通“疑难数据库(出版商)”最低求助积分说明 771307