SlFHY3 and SlHY5 act compliantly to enhance cold tolerance through the integration of myo‐inositol and light signaling in tomato

Summary Plants have evolved sophisticated regulatory networks to cope with dynamically changing light and temperature environments during day–night and seasonal cycles. However, the integration mechanisms of light and low temperature remain largely unclear. Here, we show that low red : far‐red ratio (LR : FR) induces FAR‐RED ELONGATED HYPOCOTYL3 ( SlFHY3 ) transcription under cold stress in tomato ( Solanum lycopersicum ). Reverse genetic approaches revealed that knocking out SlFHY3 decreases myo ‐inositol accumulation and increases cold susceptibility, whereas overexpressing SlFHY3 induces myo ‐inositol accumulation and enhances cold tolerance in tomato plants. SlFHY3 physically interacts with ELONGATED HYPOCOTYL5 (SlHY5) to promote the transcriptional activity of SlHY5 on MYO‐INOSITOL‐1‐PHOSPHATE SYNTHASE 3 ( SlMIPS3 ) and induce myo ‐inositol accumulation in tomato plants under cold stress. Disruption of SlHY5 and SlMIPS3 largely suppresses the cold tolerance of SlFHY3 ‐overexpressing plants and myo ‐inositol accumulation in tomato. Furthermore, silencing of SlMIPS3 drastically reduces myo ‐inositol accumulation and compromises LR : FR‐induced cold tolerance in tomato. Together, our results reveal a crucial role of SlFHY3 in LR : FR‐induced cold tolerance in tomato and unravel a novel regulatory mechanism whereby plants integrate dynamic environmental light signals and internal cues (inositol biosynthesis) to induce and control cold tolerance in tomato plants.