Nocardia arseniciresistens sp. nov., isolated from lead–zinc mine tailing

生物 16S核糖体RNA 诺卡迪亚 二氨基二甲酸 诺卡氏菌科 微生物学 拉伤 肽聚糖 放线菌 二氨基酸 阿拉伯糖 诺卡菌病 菌丝 细菌 植物 细胞壁 生物化学 基因 木糖 基因序列 发酵 链霉菌 遗传学 解剖
作者
Xiaoming Wang,Chen Xiu,Guo-Xing Zhu,Chunmei Lu,Ying Yang,Jing Zhang,Heng Dong,Sheng-Guang Xu,Lianming Liang,Shu-Kun Tang,Yan-Ru Cao
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:75 (4)
标识
DOI:10.1099/ijsem.0.006738
摘要

A strain with aerial hyphae presented, designated KC 131 T , was isolated from lead–zinc mine tailings, Lanping, Yunnan province, Southwest China. The strain was Gram-stain-positive, acid-alcohol-fast, aerobic and non-motile. Based on 16S rRNA gene sequence and phylogeny analysis, strains Nocardia ninae NBRC 108245 T (98.4%), Nocardia alba YIM 30243 T (98.4%) and Nocardia colli CICC 11023 T (98.2%) were the most closely related species of strain KC 131 T , and the four strains were in one cluster. The meso -diaminopimelic acid, arabinose and galactose were detected in the whole-cell hydrolysates. The mycolic acids were presented, and the major fatty acids (>5%) were C 16:0 (30.0%), C 18:1 ω9c (12.5%), C 18:0 (7.5%), 10-methyl C 18:0 (27.3%) and summed feature 3 (C 16:1 ω7c and/or C 16:1 ω6c; 12.4%). The menaquinone was MK-8 (H4, ω-cyclo), and the major polar lipids were diphosphatidylglycerol and phosphatidylethanolamine. All these features were consistent with the genus Nocardia . Digital DNA–DNA hybridization values between strain KC 131 T and N. ninae NBRC 108245 T , N. alba DSM 44684 T and N. colli CICC 11023 T were 23.8%, 20.9% and 23.5%, respectively. The average nucleotide identity values between strain KC 131 T and the three strains were 80.0%, 76.5% and 80.0%, respectively. In addition, some physiological and biochemical characteristics were also different. Thus, strain KC 131 T represents a novel species of the genus Nocardia , for which the name Nocardia arseniciresistens sp. nov. is proposed. The type strain is KC 131 T (=CGMCC 1.19493 T =JCM 35916 T ).
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