生物
γ蛋白杆菌
基因
假交替单胞菌
细菌
基因组
全基因组测序
深海热液喷口
GC含量
质粒
遗传学
微生物学
16S核糖体RNA
热液循环
古生物学
作者
Bowen Ji,Tong Yu,Xiang Zeng
出处
期刊:Marine Genomics
[Elsevier BV]
日期:2024-03-26
卷期号:75: 101106-101106
被引量:1
标识
DOI:10.1016/j.margen.2024.101106
摘要
Pseudoalteromonas sp. CuT4–3, a copper resistant bacterium, was isolated from deep-sea hydrothermal sulfides on the Southwest Indian Ridge (SWIR), is an aerobic, mesophilic and rod-shaped bacterium belonging to the family Pseudoalteromonadaceae (class Gammaproteobacteria, order Alteromonadales). In this study, we present the complete genome sequence of strain CuT4–3, which consists of a single circular chromosome comprising 3,660,538 nucleotides with 41.05% G + C content and two circular plasmids comprising 792,064 nucleotides with 40.36% G + C content and 65,436 nucleotides with 41.50% G + C content. In total, 4078 protein coding genes, 105 tRNA genes, and 25 rRNA genes were obtained. Genomic analysis of strain CuT4–3 identified numerous genes related to heavy metal resistance (especially copper) and EPS production. The genome of strain CuT4–3 will be helpful for further understanding of its adaptive strategies, particularly its ability to resist heavy metal, in the deep-sea hydrothermal vent environment.
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