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Transactivation DNA-binding protein–related genes were associated with salivary gland injury in primary Sjögren syndrome

交易激励 基因 免疫系统 候选基因 医学 实时聚合酶链反应 基因表达 下调和上调 基因表达谱 唾液腺 免疫学 分子生物学 遗传学 生物 病理
作者
Naidan Zhang,Hongsheng Zhang,Xiao Bao,Chengliang Yuan
出处
期刊:Medicine [Wolters Kluwer]
卷期号:103 (39): e39827-e39827 被引量:1
标识
DOI:10.1097/md.0000000000039827
摘要

The purpose was to identify transactivation DNA-binding protein–related genes in salivary gland injury in primary Sjögren syndrome (pSS) in southwest China. We downloaded the datasets of GSE7451, GSE23117, and GSE40611. In order to screen the candidate genes, 2 kinds of machine learning algorithms were used. We collected blood from 28 patients and 20 controls to verify the expression of candidate genes using quantitative real-time polymerase chain reaction. The receiver operating characteristic curve was used to evaluate the diagnostic efficiency. Correlations between candidate genes and immune cells were examined. A total of 31 differentially expressed genes were obtained. Through different algorithms, 6 genes including IFIT1 , CSF2RB , TRIM22 , PPM1H , VAMP7 , and C21orf2 were getted. Validation results suggested that the expression of CSF2RB , VAMP7 , IFIT1 , C21orf2 , and TRIM22 was significantly increased in pSS. The area under the curve of CSF2RB was 0.937 and that of TRIM22 was 0.915. Immune infiltration analysis showed that the percentage of activated mast cells was lower than the controls ( P = .025). Correlation analysis suggested that CSF2RB was associated with immune cell infiltration. The expression of CSF2RB was significantly upregulated, which could be related to the increase of γδ T cells. We revealed that CSF2RB could be the candidate gene of pSS. CSF2RB was involved by regulating various immune cells. The expression of CSF2RB was significantly upregulated, which was related to the increase of γδ T cells.
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