Bioinformatics approach reveals the critical role of inflammation-related genes in age-related hearing loss

生物 基因 小桶 炎症 基因表达谱 遗传学 发病机制 听力损失 表型 生物信息学 基因表达 计算生物学 医学 免疫学 基因本体论 听力学
作者
Xi Gu,Chenyu Chen,Yuqing Chen,Chaojun Zeng,Yanchun Lin,Runzhi Guo,Shuqin Xu,Chang‐Shen Lin
出处
期刊:Scientific Reports [Nature Portfolio]
卷期号:15 (1) 被引量:1
标识
DOI:10.1038/s41598-024-83428-x
摘要

Age-related hearing loss (ARHL) is the most prevalent sensory impairment in the elderly. However, the pathogenesis of ARHL remains unclear. This study was aimed to explore the potential inflammation-related genes of ARHL and suggest novel therapeutic targets for this condition. Initially, a total of 105 Inflammatory related differentially expressed genes (IRDEGs) were obtained by overlapping the differentially expressed genes from the GSE49522 and GSE49543 datasets with Inflammatory related genes. The IRDEGs were mainly enriched in MAPK, PI3K-Akt, Hippo and JAK-STAT pathways by analysis of Gene Ontology and Kyoto Encyclopedia of Genes and Genomes. We then identified 10 key IRDEGs including Alox5ap, Chil1, Clec7a, Dysf, Fcgr3, etc. using Least absolute shrinkage and selection operator regression analysis and converted them into human genes. The ROC curve indicated that Alox5ap expression presented a high accuracy in distinguishing between different groups. By CIBERSORT algorithm, 8 humanized key IRDEGs were correlated with the infiltration abundance of 3 immune cells. Finally, it showed that the Alox5ap expression was significantly more effective compared to other variables in the diagnostic model of ARHL. This study suggests that inflammation might play a role in the development of ARHL, providing a deeper understanding of the underlying causes of this disease.

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