A binary matrix of 2,5‐dihydroxybenzoic acid and glycerol produces homogenous sample preparations for matrix‐assisted laser desorption/ionization mass spectrometry

Abstract We introduce a two‐component matrix for ultraviolet matrix‐assisted laser desorption/ionization mass spectrometry (UV‐MALDI‐MS) that consists of 2,5‐dihydroxybenzoic acid (DHB) and glycerol. Upon slow evaporation of residual water/methanol solvents in a pre‐vacuum chamber sample preparations are obtained that exhibit a homogeneous morphology with analyte‐matrix crystals evenly distributed over the whole sample spot. At a molar DHB/glycerol ratio of ∼1:5, the crystals range in length from ∼100 to 300 µm and are about 15–30 µm wide. Mass spectra of peptides, proteins, and an oligosaccharide are presented and compared with those recorded from standard dried‐droplet DHB matrix. The ion signals show a reproducibility of the order of 10–15% when scanning the surface of an individual sample or even different samples that contain the same amount of peptide, A close to linear relationship between peptide concentration and the corresponding peptide ion signal is found over three orders of magnitude of sample prepared. However, when a fixed position is irradiated with a large number of laser pulses, a monotonous decay of peptide ion signal with time is observed. Potentially, the binary matrix will be especially useful for the analysis of samples that are stabilized in buffered aqueous glycerol solution and preliminary results addressing this aspect are shown. Copyright © 2007 John Wiley & Sons, Ltd.