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Exploring the effect of active components in oil tree peony seed meal on swine disease resistance and its potential mechanisms based on network pharmacology and molecular docking

基因 小桶 计算生物学 对接(动物) 活性化合物 活性成分 生物 化学 药理学 生物化学 基因本体论 医学 基因表达 立体化学 护理部
作者
Yang Xu,Xian Xue,Yinglong He,Peng Song,Lili Guo,Xiaogai Hou
出处
期刊:Chemistry & Biodiversity [Wiley]
卷期号:21 (12)
标识
DOI:10.1002/cbdv.202401384
摘要

Abstract This study aims to explore the feasibility of using network pharmacology and molecular docking technology to predict the effects of active components from oil tree peony seed meal (PSM) on swine diseases. Ten active components of PSM were screened Screening through literature search and network pharmacology standards, including Betulinic acid, Quercetin, Kaempferol, Luteolin, Isorhamnetin, Hydroxygenkwanin, Hederagenin, Benzoyl Paeoniflorin, Albiflorin, Paeoniflorin. Ten types of swine diseases were selected, including African Swine Fever, Aftosa, Swine Vesicular Disease, Transmissible Gastroenteritis, Swine Streptococcal Infection, Blue Aural Disease, Swine Infectious Atrophic Rhinitis, Swine Influenza, Swine Erysipelas, Swine Epidemic Encephalitis. The results showed that the average number of cross genes between the potential target genes of PSM active components and each swine disease target gene accounted for 7.64 % of the total number of swine disease target genes. The GO enrichment analyses showed that putative targets exist in endosomes, lysosomes, cell membranes, nerves, growth factor activity, receptor tyrosine kinase binding, enzyme binding, growth factor binding, transcription coactivator binding, oxidoreductase activity, prostaglandin E receptor activity and insulin receptor substrate binding. The KEGG enrichment analysis results showed that these putative genes were involved in various cancer progression pathways, signaling pathways, and hormone regulatory pathways. A total of 8 core targets were obtained through protein‐protein interaction networks analysis, including Protein Kinase CAMP‐Activated Catalytic Subunit Alpha (PRKACA), Non‐Receptor Tyrosine Kinase (SRC), Mitogen‐Activated Protein Kinase 1 (MAPK1), E1A Binding Protein P300 (EP300), Hypoxia Inducible Factor 1 Subunit Alpha (HIF1A), Phosphatidylinositol‐4,5‐Bisphosphate 3‐Kinase Catalytic Subunit Beta (PIK3CB), C‐X‐C chemokine receptor type 4 (CXCR4) and Estrogen Receptor 2 (ESR2). The HIF‐1 signaling pathway was found to be associated with all 10 selected swine diseases. The PD‐L1 expression, and PD‐1 checkpoint pathway in cancer, and thyroid hormone signaling pathway were not only enriches the core target with a quantity of 7, but also associated with 9 Swine diseases. In addition, the molecular docking results indicate that the core ingredients have strong affinity with hub genes. The research suggests that the active components of PSM may intervene in swine diseases through multiple components, targets, and pathways.

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