Artificial Intelligence, Big Data and Machine Learning Approaches in Precision Medicine & Drug Discovery

支持向量机 随机森林 虚拟筛选 人工智能 计算机科学 药物发现 机器学习 数量结构-活动关系 药物重新定位 决策树 人工神经网络 深度学习 药品 计算生物学 生物信息学 生物 医学 药理学
作者
Anuraj Nayarisseri,Ravina Khandelwal,Poonam Tanwar,Maddala Madhavi,Diksha Sharma,Garima Thakur,Alejandro Speck‐Planche,Sanjeev Kumar Singh
出处
期刊:Current Drug Targets [Bentham Science Publishers]
卷期号:22 (6): 631-655 被引量:92
标识
DOI:10.2174/1389450122999210104205732
摘要

Artificial Intelligence revolutionizes the drug development process that can quickly identify potential biologically active compounds from millions of candidate within a short period. The present review is an overview based on some applications of Machine Learning based tools, such as GOLD, Deep PVP, LIB SVM, etc. and the algorithms involved such as support vector machine (SVM), random forest (RF), decision tree and Artificial Neural Network (ANN), etc. at various stages of drug designing and development. These techniques can be employed in SNP discoveries, drug repurposing, ligand-based drug design (LBDD), Ligand-based Virtual Screening (LBVS) and Structure- based Virtual Screening (SBVS), Lead identification, quantitative structure-activity relationship (QSAR) modeling, and ADMET analysis. It is demonstrated that SVM exhibited better performance in indicating that the classification model will have great applications on human intestinal absorption (HIA) predictions. Successful cases have been reported which demonstrate the efficiency of SVM and RF models in identifying JFD00950 as a novel compound targeting against a colon cancer cell line, DLD-1, by inhibition of FEN1 cytotoxic and cleavage activity. Furthermore, a QSAR model was also used to predict flavonoid inhibitory effects on AR activity as a potent treatment for diabetes mellitus (DM), using ANN. Hence, in the era of big data, ML approaches have been evolved as a powerful and efficient way to deal with the huge amounts of generated data from modern drug discovery to model small-molecule drugs, gene biomarkers and identifying the novel drug targets for various diseases.
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