The optimization of Nattokinase liquid fermentation by Bacillus natto was investigated in this paper. The results indicated that when the fermentation medium was prepared with soya peptone 3%, glucose 2%, Na2HPO4 0.6%, NaH2PO4 0.1%, CaCl2 0.02% and MgSO4 0.05%, pH 7.0-7.2, and inoculums 2%, the yield of Nattokinase reached 736 IU Urokinase/ml after fermentation for 60 h at 37℃ under 200 r/min condition.