Robertmurraya mesotrionivorans sp. nov., a mesotrione-degrading strain isolated from farmland soil

生物 16S核糖体RNA 拉伤 系统发育树 植物 磷脂酰甘油 系统发育学 基因 全基因组测序 基因型 核糖体RNA 基因组大小 盐度 序列分析
作者
Hao Wu,Jialu Li,Yingying Wan,Miaohuan Xiong,Jian He,Xuelan Chen,Bin Liu
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:75 (10)
标识
DOI:10.1099/ijsem.0.006956
摘要

A Gram-stain-positive, aerobic, rod-shaped and non-motile bacterium, designated strain P23T, was isolated from farmland soil in Nanchang, Jiangxi Province, China. Growth was observed at 4-42 °C (optimum 37 °C), pH 5.0-9.0 (optimum pH 7.0) and salinity of 0-4.0% (w/v, optimum 1.0%). Strain P23T could completely degrade 30 mg l-1 of mesotrione within 48 h of incubation. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain P23T belongs to the genus Robertmurraya and showed the highest sequence similarity to Robertmurraya beringensis BR035T (98.8%) and Robertmurraya korlensis ZLC-26T (98.6%). The draft genome of strain P23T was ~5.2 Mb with a 38.2mol% G+C content. The average nucleotide identity values between P23T and its most closely related type strains R. beringensis BR035T and R. korlensis ZLC-26T were 91.5% and 87.4%, respectively, and the digital DNA-DNA hybridization values between them were 48.8% and 38.0%, respectively. The predominant fatty acids (≥5% of the total) of strain P23T were iso-C15 : 0, anteiso-C15 : 0, iso-C15 : 1 F, C16 : 0 and iso-C17 : 0. The major isoprenoid quinone was MK-7. The major polar lipids of strain P23T were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and three unidentified phospholipids. Based on phenotypic, genotypic and phylogenetic evidence, strain P23T represents a novel species in the genus Robertmurraya, for which the name Robertmurraya mesotrionivorans sp. nov. is proposed. The type strain is P23T (=GDMCC 1.4869T=KCTC 43732T=KACC 23834T).

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