Objective: Serial ultrasonographic assessment of the effect of different modes of mechanical ventila - tion on diaphragmatic thickness and consequently its effect on weaning of mechanical ventilation, total ventilatory days, ICU stay and mortality. Patients and methods: This study was carried out on 67 mechanically ventilated adult patients of both genders who were admitted to Critical Care Medicine Department in A lexandria main university hospital over a period from 1/4/2014 to 30 9 2014. All patients were subjected to complete medical and surgical history taking, complete physical examination and daily ultrasonographic assessment of diaphragmatic thickness. Resul ts: Diaphragmatic atrophy was detected in 15 patients (78.9%) of patients on CMV, 14 patients (60.9%) of patients on assisted MV in comparison to only one patient (4%) of patients on spontaneous MV (P<0.001). Patients who developed diaphragmatic atrophy ha d a mean total ventilatory days 7.23 ± 2.39 days, mean ICU stay 9.08 ± 2.91 days, mortality rate 16.7%, primary weaning failure rate 52% and secondary weaning failure rate 36% while Patients who did not develop diaphragmatic atrophy had a mean total ventil atory days 4.32 ± 2.44 days, mean ICU stay 7.59± 2.63 days, mortality rate 8.1%, primary weaning failure rate 5.4% and secondary weaning failure rate 5.4%. (P1 < 0.001 P2 = 0.03 P3 = 0.451 P4 <0.001 P5 <0.001 respectively). Conclusion: Mechanical venti lation induces diaphragmatic atrophy which is significantly higher with controlled and assisted mechanical ventilation modes than spontaneous modes. Ventilator induced diaphragmatic atrophy is associated with higher rates of primary and secondary weaning f ailure, more ventilatory days, longer ICU stay.