生物
非翻译区
适应(眼睛)
转录组
翻译(生物学)
进化生物学
缺氧(环境)
计算生物学
信使核糖核酸
保守序列
三素数非翻译区
生物信息学
遗传学
基因表达
细胞生物学
基因
神经科学
肽序列
氧气
有机化学
化学
作者
Manfei Liang,Qingyou Zhao,Yixiang Song,Jianchao Chen
出处
期刊:Epigenomics
[Future Medicine]
日期:2023-10-01
卷期号:15 (20): 1069-1084
被引量:1
标识
DOI:10.2217/epi-2023-0245
摘要
Adaptation to variations in oxygen concentration is a conserved mechanism in all metazoans. Extensive studies have been focused on the roles of hypoxia-inducible factors (HIFs) in response to hypoxia. However, HIF1α is not conserved in all animals, and HIF2α and HIF3α are only observed in vertebrates. In this review, we discuss mechanisms enabling three cross-species to adapt to hypoxic conditions. Using transcriptomic data of hypoxia-induced genes from distantly related metazoans, we analyzed the enrichment and conservation of mRNA determinants such as transcript, CDS, 5′UTR and 3′UTR size. We found that long genes are enriched in hypoxia-induced transcripts and might be translated in a 3′UTR-dependent manner. We hope our work can provide a new direction on investigating alternative mechanisms for mRNA translation under hypoxia.
科研通智能强力驱动
Strongly Powered by AbleSci AI