纳秒
皮秒
蛋白质动力学
球状蛋白
绿色荧光蛋白
肌红蛋白
化学物理
动力学(音乐)
分子动力学
化学
放松(心理学)
生物物理学
荧光
结晶学
扩散
物理
计算化学
光学
生物
热力学
激光器
生物化学
有机化学
神经科学
声学
基因
作者
Jonathan D. Nickels,Victoria García Sakai,Alexei P. Sokolov
摘要
We present analysis of nanosecond-picosecond dynamics of Green Fluorescence Protein (GFP) using neutron scattering data obtained on three spectrometers. GFP has a β-barrel structure that differs significantly from the structure of other globular proteins and is thought to result in a more rigid local environment. Despite this difference, our analysis reveals that the dynamics of GFP are similar to dynamics of other globular proteins such as lysozyme and myoglobin. We suggest that the same general concept of protein dynamics may be applicable to all these proteins. The dynamics of dry protein are dominated by methyl group rotations, while hydration facilitates localized diffusion-like motions in the protein. The latter has an extremely broad relaxation spectrum. The nanosecond-picosecond dynamics of both dry and hydrated GFP are localized to distances of ∼1-3.5 Å, in contrast to the longer range diffusion of hydration water.
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