Ferroptosis-related genes for predicting prognosis of patients with laryngeal squamous cell carcinoma

小桶 比例危险模型 基因 肿瘤科 生存分析 队列 癌症研究 接收机工作特性 内科学 曲线下面积 Lasso(编程语言) 医学 生物 生物信息学 基因表达 转录组 遗传学 计算机科学 万维网
作者
Fang Han,Wenfei Li,Tao Chen,Yutong Yao,Jinglong Li,Di Wang,Zhanqiu Wang
出处
期刊:European Archives of Oto-rhino-laryngology [Springer Science+Business Media]
卷期号:278 (8): 2919-2925 被引量:21
标识
DOI:10.1007/s00405-021-06789-3
摘要

Previous studies reported that ferroptosis-related genes can regulate the process of tumor cell changes by regulating iron metabolism. However, the prognostic value of ferroptosis-related genes in LC remains to be further elucidated. Ferroptosis-related gene expression profiles of coexisting ferroptosis-related genes were extracted from both cohorts (TCGA and GSE27020) for eligible analysis. LASSO Cox regression was utilized to build an optimum ferroptosis-related prognostic model. Kaplan–Meier curve was performed by log‐rank test, and time‐dependent ROC curve was constructed to evaluate the predictive power of this signature in both cohorts. GO and KEGG enrichment analysis was used to investigate the potential mechanism of differential enrichment signal pathways. 112 LC patients from the TCGA cohort and 108 LC patients with clinical information from the GEO cohorts were eventually included in the study. Three ferroptosis-related genes were identified as an independent risk factor to establish the prognostic risk score. Kaplan–Meier curve represented that patients with high-risk group favors with worse OS than their low-risk group (P = 0.04). The good performance of the gene signature for predicting OS was evaluated by area under the curve (AUC) of time-dependent ROC curves achieved 0.74 at 3 years, and 0.70 at 5 years. Similar performance has been proved in the external validation cohort. GO and KEGG enrichment analysis have been performed to explore the signaling pathways and underlying mechanisms were significantly active in LC patients. In summary, our study developed a ferroptosis-related model that could be an effective biomarker to predict the prognosis of laryngeal cancer.
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