放大器
生物
多重聚合酶链反应
扩增子测序
多路复用
基因组
计算生物学
DNA测序
纳米孔测序
全基因组测序
遗传学
聚合酶链反应
病毒学
基因
16S核糖体RNA
作者
Junhong Luo,Yao Huang,Yan Guo,Zixinrong Meng,Kun Zhao,Xiaojuan Zhu,Lina Zhou,Tao Wu,Qiao Qiao,Yiyue Ge,Qi Xu,Lunbiao Cui
出处
期刊:Future Virology
[Future Medicine]
日期:2023-09-01
卷期号:18 (13): 827-837
标识
DOI:10.2217/fvl-2023-0083
摘要
Aim: This study aimed to establish a simple whole-genome sequencing method for respiratory virus type A (RSVA) used in genomic epidemiological studies. Methods: Multiple primers were designed to amplify overlapping amplicons specific to RSVA. The amplicons were sequenced using Illumina and Nanopore sequencing platforms and the sequencing performances of the two platforms were also compared. Results: The study shows that the developed method could recover almost full genomes of RSVA when Ct values were less than 33 for clinical samples. Conclusion: In this study, a whole-genome sequencing method was developed for RSVA based on multiplex PCR.
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