DNA methylation and expression of LGR6 gene in ankylosing spondylitis: A case-control study

甲基化 DNA甲基化 CpG站点 照明菌甲基化试验 亚硫酸氢盐测序 甲基化DNA免疫沉淀 生物 分子生物学 表观遗传学 外周血单个核细胞 基因 聚合酶链反应 基因表达 遗传学 体外
作者
Yujie Deng,Wei Xu,Man Ni,Xiaoya Sun,Xinqi Wang,Tao Zhang,Faming Pan
出处
期刊:Human Immunology [Elsevier BV]
卷期号:84 (12): 110719-110719 被引量:4
标识
DOI:10.1016/j.humimm.2023.09.005
摘要

The objectives of the present research were to ascertain the relationship of Leucine-Rich Repeat-Containing G-Protein Coupled Receptors 6 (LGR6) methylation and transcript levels with ankylosing spondylitis (AS). Targeted bisulfite sequencing was applied to analyze LGR6 DNA methylation in 81 AS cases and 81 controls. Besides, the LGR6 transcription level of peripheral blood mononuclear cells (PBMCs) from 70 AS cases and 64 controls was measured utilizing quantitative real-time transcription-polymerase chain reaction (qRT-PCR). The study detected the methylation levels of 43 sites in two CpG (cytosine-guanine dinucleotide) islands of LGR6 and found that LGR6 were significantly hypomethylated in AS patients (LGR6_1: P = 0.002; LGR6_2: P < 0.001). LGR6 transcript level was obviously reduced in AS (P = 0.001) and was positively related to DNA methylation level (CpG-1: P = 0.010; CpG-2: P = 0.007). Besides, the Receiver operating characteristic curve (ROC) exhibited good diagnostic performance of LGR6 methylation level (AUC = 0.676, 95% CI = 0.594–0.758, P < 0.001). Further subgroup analysis revealed that gender may affect the LGR6_1 methylation pattern. The present study revealed that LGR6 DNA methylation dysregulation may be involved in the pathogenesis of AS from an epigenetic perspective for the first time, with the aim of providing new directions for biomarker identification and treatment development for AS patients.
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