Complete genome sequence of a novel recombinant Muscovy duck parvovirus isolated in the Heilongjiang province of China

Muscovy duck parvovirus (MDPV) is fatal for young ducklings of less than 3 weeks of age and has caused severe economic loss in duck production in many countries and regions. We report here on a complete genome sequence of a recombinant MDPV strain YL08 isolated from an ill Muscovy duck in 2008 at Qiqihar, Heilongjiang province, China. This genome, MDPV YL08, was 5061 nucleotides long and retained the two ORFs, which are typical in the Parvovirinae family. The genome of YL08 strain has a putative recombination breakpoint on its VP1 gene. This study has helped our understanding of the genetic diversity and virus evolution of MDPV isolates.