生物
磷酸烯醇式丙酮酸羧化酶
植物
系统发育树
浮游植物
水华
系统发育学
核糖体RNA
基因
生态学
光合作用
遗传学
营养物
作者
Darcie E Ryan,Lisa Campbell
摘要
Dense blooms of toxin‐producing Karenia brevis increase local surface ocean pH through CO 2 uptake. To identify genes that may contribute to bloom‐related environmental pH and p CO 2 changes, transcriptomes with RNA from K. brevis Wilson cultures that had been acclimated to low CO 2 (250 ppm) or recent CO 2 (350 ppm) p CO 2 levels were assembled. Among the annotated transcripts were PEPC , PPDK , and PEPCK enzymes found in the model C4 carbon fixation pathway. Previous studies have demonstrated that the enzymatic activity of PEPC , PPDK , and/or PEPCK in some algae species, including marine diatoms, is influenced by variations in dissolved inorganic carbon. We found significantly similar PEPC , PPDK , and PEPCK enzymes in the transcriptomes of K. brevis and two sister species Karenia papilionacea , and Karenia mikimotoi . One or more isoforms of PEPC were also identified in the transcriptomes of thirty additional photosynthetic phytoplankton species from nine phyla. Phylogenetic trees were constructed with neighbor joining and maximum likelihood techniques to characterize the evolutionary relationship among phytoplankton, terrestrial plant C4, and terrestrial plant C3 PEPC sequences. Based on the nucleotide trees constructed during this study, the Karenia PEPC transcripts were more closely related to the terrestrial C4 genes than the terrestrial C3 genes. Furthermore, PEPC phylogeny among phytoplankton closely resembles phylogenetic trees constructed with ribosomal RNA . This study confirmed that the toxin‐producing dinoflagellates K. brevis , K. mikimotoi , and K. papilionacea express putative PEPC , PEPCK , and PPDK transcripts.
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