Nocardiopsis protaetiae sp. nov., a novel actinobacterium isolated from the frass of Protaetia brevitarsis larvae

生物 菌丝 16S核糖体RNA 菌丝体 微生物学 拉伤 系统发育树 植物 基因 解剖 遗传学
作者
Yongqiang Liu,Lida Zhang,Xilang Yang,Jialei Xiao,Hanxun Ju,Cheng‐Xin Li,Changlong Shu,Xiangjing Wang,Junwei Zhao,Wensheng Xiang
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:75 (7)
标识
DOI:10.1099/ijsem.0.006832
摘要

Four actinobacterial strains, designated NEAU-PBA1 T , NEAU-PB14, NEAU-PB65 and NEAU-PB77, were isolated from the frass of Protaetia brevitarsis collected from Harbin, Heilongjiang Province, China. These strains were Gram-stain positive, aerobic and produced branched substrate mycelium and aerial hyphae, without producing diffusible pigments in the tested media. Upon maturity, spore chains formed on the aerial hyphae, while the mycelium fragmented with age. The genome sizes of these four strains ranged from 7.41 to 7.49 Mbp, with the genomic DNA G+C content varying from 71.8% to 72.9%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that these four strains belonged to the genus Nocardiopsis and exhibited high sequence similarity with Nocardiopsis changdeensis Mg02 T . The average nucleotide identity and digital DNA–DNA hybridization values between these four isolates exceeded the threshold for species delineation, while the values between the four isolates and their close relatives were below the threshold. The predominant menaquinones in strain NEAU-PBA1 T are MK-10 (H 4 , H 6 , H 8 ) and MK-10, while the phospholipids included diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, phosphoglycolipid, phosphatidylcholine, one phospholipid and one lipid. The major cellular fatty acids comprised anteiso -C 15:0 , iso -C 16:0 , anteiso -C 17: 0 and C 18:1 ω 9 c . Based on polyphasic taxonomic analysis, strains NEAU-PBA1 T , NEAU-PB14, NEAU-PB65 and NEAU-PB77 were identified as a novel species within the genus Nocardiopsis , and the name Nocardiopsis protaetiae sp. nov. was proposed. The type strain is NEAU-PBA1 T (=MCCC 1K08877 T =JCM 37021 T ).
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